Banana Bread Protein Muffins
These banana bread protein muffins are a delicious breakfast or snack! This recipe is perfect if you’re counting macros or you want a high protein muffin for breakfast!

I’ll admit that I don’t typically like “protein” recipes that are made with protein powder. I’ve tried dozens of recipes in the past and most of them just don’t taste quite right. These are a little higher in calories because of the almond flour, but it makes the texture of these muffins perfectly moist, even with the addition of protein powder.
Why You’ll Love These Protein Muffins
- High protein, low sugar – Perfect for anyone counting macros or looking for a satisfying breakfast.
- Moist and fluffy – Thanks to almond flour and mashed bananas, they don’t have the chalky texture some protein recipes do.
- Lower in calories than bakery muffins – At just ~150 calories each, you can enjoy one (or two!) guilt-free.
- Great for meal prep – Make a batch, freeze extras, and grab them on busy mornings.
If you love this recipe, be sure to try my high protein banana bread recipe!

What are protein muffins?
Protein “muffins” are a popular way to turn protein powder and other wholesome ingredients into a tasty snack! They’re a good way to get in lots of protein with minimal fat and sugar. I had an older version of this recipe on the site, but I’ve replaced it with this one because I think the taste and texture is much better! They’re slightly higher in calories, but the trade off is worth it!
The Best Protein Powder for Muffins
I recommend using Clean Simple Eats vanilla whey protein for these muffins. I generally try to use plant-based protein powders, but I find that whey protein is best for baking. If you try other forms of protein powder, you may need to make adjustments. I recommend weighing it if you have a food scale. I used 60g of protein powder for this recipe. My protein powder scoop is just over 1/4 cup, so I used just over 1/2 cup of protein powder in this recipe. I’ve made this recipe with whey protein and plant-based protein. You can use chocolate or vanilla flavor.
How to Make Banana Bread Protein Muffins




Protein Muffin Variations and Ideas
Feel free to get creative with mix-ins! You could add chocolate chips, walnuts, or cinnamon! Try topping these with a dollop of peanut butter or drizzling with PB2 for even more protein. If you’re looking for other protein-packed breakfast recipes, try my protein pancakes!
How to Store Leftover Muffins
Store these muffins in an airtight container at room temperature for up to 2 days — or keep them in the refrigerator for up to 5 days. For longer storage, wrap the muffins individually and freeze them for up to 2 months. When you’re ready to enjoy, simply reheat in the microwave for 20–30 seconds.
Print
High Protein Banana Muffins
- Prep Time: 10 mins
- Cook Time: 25 mins
- Total Time: 35 minutes
- Yield: 18 muffins 1x
- Category: Breakfast
- Method: Oven
- Cuisine: Snack
- Diet: Vegetarian
Description
These banana bread protein muffins are a delicious breakfast or snack! This recipe is perfect if you’re counting macros or you want a high protein muffin for breakfast!
Ingredients
- 2 1/2 cups (280g) almond flour (do not pack it)
- 1/2 cup (60g) vanilla whey protein powder (I recommend Clean Simple Eats vanilla whey protein)
- 1 teaspoon baking soda
- 1/2 teaspoon baking powder
- 1/2 teaspoon salt
- 1 cup (220g) mashed ripe bananas (2-3 bananas)
- 1/3 cup almond milk
- 1/2 cup plain Greek yogurt (I used fat-free but any plain kind is fine)
- 2 eggs
- 1 tablespoon coconut oil, melted
- 1/4 cup maple syrup
- 1 teaspoon vanilla extract
Instructions
- Preheat oven to 325 degrees.
- Line a muffin pan with parchment paper liners and spray the liners with non-stick spray
- Stir all dry ingredients together in a mixing bowl
- In a separate bowl mix together bananas, almond milk, yogurt, eggs, vanilla, melted coconut oil, and maple syrup. Stir until combined.
- Pour wet ingredients into dry and slowly fold together. Do not over mix. Divide into prepared muffin pan.
- Bake for 25 minutes or until a toothpick inserted comes out clean. (If it starts to get too brown on top, cover loosely with foil while it continues to bake)
Notes
This recipe was originally published in 2015, but I updated this recipe in 2025 to improve the taste and texture. These are now a little higher in calories, but the taste and texture is worth it!
i have tried some protein based baked goods in the past but it always tastes off and have a pretty dense texture. what protein powder do you use?
These are definitely dense (and not as fluffy as a reguar muffin) but with a little peanut butter, they hit the spot! I use a vanilla whey protein powder that I got from My Mix Nutrition (a website that lets you customize your protein powder.)
Yum! I LOVE having mini protein muffins on hand. I am always crazy hungry when I get in the door, so having snacks readily available are a must for me. Now I want to stalk all your old muffin recipes. 🙂
I love muffins, I’ll have to give these a try!
Muffins are awesome. I even love the flax ones from Mom’s Organic Market. I’m dairy free, so do you think substituting the greek yogurt with coconut milk yogurt would be OK?
Ah I just made some banana bread and now I’m wishing I held off so I could have made it as these muffins instead! Next time.
Marty is out of town this evening so I think I’ll make these 🙂 I have all of the ingredients on hand (always a plus) and I haven’t eaten dessert in almost four weeks so I feel like this will be a nice little substitution!
Let me know how you like it! 🙂
60 calorie muffins?! I’m in, considering I almost always eat two of them in one sitting when I make homemade ones 😉
I never make protein muffins this way because I have still not succumbed to trying protein powder! I just use eggs and greek yogurt to up the protein in my oat muffins. But these look delicious…I think I may need to give it a try soon!
I need to be better about having snacks on hand. May need to spend some time this weekend making a few healthy goodies!
I’m usually weary of recipes with protein powder in them (fear of chalky tastes) but this looks yummy! Thanks for sharing!
Same here. Although mine didn’t look anything like the photo and of course turned out just like I thought. Dry and weird looking.